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DnaSP:基因多态性分析软件

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简介

基因多态性分析软件,输入比对后的DNA序列文件,进行基因多态性分析。

DnaSP, DNA Sequence Polymorphism, is a software package for the analysis of nucleotide polymorphism from aligned DNA sequence data. DnaSP can estimate several measures of DNA sequence variation within and between populations (in noncoding, synonymous or nonsynonymous sites, or in various sorts of codon positions), as well as linkage disequilibrium, recombination, gene flow and gene conversion parameters. DnaSP can also carry out several tests of neutrality: Hudson, Kreitman and Aguadé (1987), Tajima (1989), McDonald and Kreitman (1991), Fu and Li (1993), and Fu (1997) tests. Additionally, DnaSP can estimate the confidence intervals of some test-statistics by the coalescent. The results of the analyses are displayed on tabular and graphic form.

软件信息

适用平台:windows(Mac Linux可用虚拟机或者wine使用)

软件性质:免费;

官方网站:http://www.ub.edu/dnasp/DnaSP_OS.html

下载

DnaSP5.1版(内有中英文使用说明)

教程推荐

使用DnaSP计算核苷酸多样性和单倍型多样性

利用DnaSP计算Ka/Ks



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