蛋白跨膜区预测方法在线资源汇总

Computer-assisted analysis of viroporin 2B sequence.

The prediction of TM helices was done using up to 10 of the most common methods available on the Internet:

DAS (14) (http://www.sbc.su.se/∼miklos/DAS),

PHDhtm (47) (http://www.predictprotein.org/),

MEMSAT3 (28) (http://bioinf.cs.ucl.ac.uk/psipred/),

MEMSAT-SVM (43) (http://bioinf.cs.ucl.ac.uk/psipred/),

SOSUI (26) (http://bp.nuap.nagoya-u.ac.jp/sosui/),

TMHMM (29) (http://www.cbs.dtu.dk/services/TMHMM),

TMPred (http://www.ch.embnet.org/software/TMPRED_form.html),

ΔG Prediction Server (24, 25) (http://www.cbr.su.se/DGpred/),

SPOCTOPUS (60) (http://octopus.cbr.su.se/),

TopPRED (12) (http://www.sbc.su.se/∼erikw/toppred2/).

以上转自:Membrane integration of poliovirus 2B viroporin.
Martínez-Gil L, Bañó-Polo M, Redondo N, Sánchez-Martínez S, Nieva JL, Carrasco L, Mingarro I.
J Virol. 2011 Nov;85(21):11315-24. Epub 2011 Aug 10. http://jvi.asm.org/content/85/21/11315.long

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